AMPDB_811 | Lantibiotic mutacin B-Ny266

PEPTIDE SUMMARY

Lantibiotic mutacin B-Ny266

1 General Description

AMPDB ID: AMPDB_811

Protein Names: Lantibiotic mutacin B-Ny266

Protein Family: Type A lantibiotic family

Gene Name: Nil

Source Organism: Streptococcus mutans

Protein Length: 22 AA

Protein Existence: Evidence at protein level

2 Protein Sequence & Composition

2.1 Sequence

FKSWSFCTPGCAKTGSFNSYCC

FASTA format

2.2 Composition

Counts of Amino Acids

'A': 1, 'R': 0, 'N': 1, 'D': 0, 'C': 4, 'Q': 0, 'E': 0, 'G': 2, 'H': 0, 'I': 0, 'L': 0, 'K': 2, 'M': 0, 'F': 3, 'P': 1, 'S': 4, 'T': 2, 'W': 1, 'Y': 1, 'V': 0

Frequencies of Amino Acids

'A': 4.55%, 'R': 0%, 'N': 4.55%, 'D': 0%, 'C': 18.18%, 'Q': 0%, 'E': 0%, 'G': 9.09%, 'H': 0%, 'I': 0%, 'L': 0%, 'K': 9.09%, 'M': 0%, 'F': 13.64%, 'P': 4.55%, 'S': 18.18%, 'T': 9.09%, 'W': 4.55%, 'Y': 4.55%, 'V': 0%

Missing Amino Acid(s)

D, E, H, I, L, M, Q, R, V

Most Occurring Amino Acid(s)

C, S

Less Occurring Amino Acid(s)

A, N, P, W, Y

Hydrophobic Amino Acid(s) Count

Hydrophilic Amino Acid(s) Count

Basic Amino Acid(s) Count

Acidic Amino Acid(s) Count

Modified Amino Acid(s) Count

Modified Amino Acid(s) Frequencies

Computed by biopython (version 1.79) & proteinAnalysis (version 1)

3 Physicochemical Properties

Sl. No.	Properties	Values	Reference
1.	Molecular Mass	2424.76 Da	Computed by ProtParam module (biopython 1.79)
2.	Aliphatic Index	4.545	Computed by ProtParam module (biopython 1.79)
3.	Instability Index (Half Life)	13.673	Computed by ProtParam module (biopython 1.79)
4.	Hydrophobicity (GRAVY)	-0.014	Computed by ProtParam module (biopython 1.79)
5.	Hydrophobic Moment	0.173	Computed by ProtParam module (biopython 1.79)
6.	Isoelectric Point	8.335	Computed by ProtParam module (biopython 1.79)
7.	Charge (at pH 7)	1.749	Computed by ProtParam module (biopython 1.79)
8.	Secondary Structure Fraction	0.227, 0.364, 0.045 [Helix, Turn, Sheet]	Computed by ProtParam module (biopython 1.79)
9.	Aromaticity	0.227	Computed by ProtParam module (biopython 1.79)
10.	Molar Extinction Coefficient (cysteine\|cystine)	6990, 7240	Computed by ProtParam module (biopython 1.79)

4 Activity Details

4.1 Target Organism(s)

Gram Positive Bacteria

4.2 Antimicrobial Activity

Antibiotic, Antimicrobial, Bacteriocin, Lantibiotic, Anti-gram-Positive

4.3 Enzymatic Activity

Not found

4.4 Inhibitory Effect

Not found

4.5 Other Biological Activity

Non-hemolytic, Non-ribosomal

Activity data manually curated from Literature and UniProt

5 Database Cross-references

5.1 Literature Database

5.1.1 PubMed

Citation 1: Mota-Meira M, Lacroix C, LaPointe G, et al. Purification and structure of mutacin B-Ny266: a new lantibiotic produced by Streptococcus mutans. FEBS Lett. 1997;410(2-3):275-9. Published 1997 Jun 30. doi:10.1016/s0014-5793(97)00425-0

PMID: 9237644

5.2 Protein Sequence Databases

UniProt: P80666

5.3 3D Structure Databases

No PDB Ids found

AlphaFoldDB: P80666

5.4 Nucleotide Sequence Databases

No entries found in GenBank or EMBL

CCDS: Not found

RefSeq: Not found

5.5 Protein-Protein Interaction Databases

STRING: Not found

IntAct: Not found

MINT: Not found

DIP: Not found

BioGRID: Not found

5.6 Ligand Databases

BindingDB: Not found

DrugBank: Not found

ChEMBL: Not found

5.7 Family & Domain Databases

InterPro: IPR006079

PANTHER: Not found

PROSITE: Not found

5.8 Genome Annotation Databases

Ensembl: Not found

KEGG: Not found

5.9 Phylogenomic Databases

GeneTree: Not found

5.10 Enzyme & Pathway Databases

BRENDA: Not found

BioCyc: Not found

5.11 Protein-RNA Interaction Databases

RNAct: Not found

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