AMPDB_543 | Mannose glucose-specific lectin

PEPTIDE SUMMARY

Mannose glucose-specific lectin

1 General Description

AMPDB ID: AMPDB_543

Protein Names: Mannose glucose-specific lectin (PpeL)

Protein Family: Jacalin lectin family

Gene Name: Nil

Source Organism: Parkia pendula (Inga pendula)

Protein Length: 447 AA

Protein Existence: Evidence at protein level

2 Protein Sequence & Composition

2.1 Sequence

QLKGMISVGPWGGQGGDHWSFKANHAITEILIHVKDNIKSISFKDASGDISGTFGGKDPRENEKGDEKKIGIHWPTEYLKSISGSYGDYNGLLVIRSLSFITNLTTYGSFGSTSGGESFSIPIADSVVVGFHGRGGYYLDALGVFVKPVPHGTISFGPWGGPAGDDAFNFKVGSWIKDIIIYSNGAIQSIAFKDGNGHCYGKFGGKDPNDIGVEKKVEIDGNLEHLTSISGTYGNYKGFEVVTSLSFITNVTKHGPFGTASGTSFSIPIEGSLVTGFHGKGGYYLDSIGIYVKPRDVEGSISIGPWGGSGGDPWSYTANEGINQIIIYAGSDIKSLAFKDTSGFDSATFGGVNPKDTGEKNTVSINWPSEYLTSISGTYGQYKFKDVFTTITSLSFTTNLATYGPFGKASGTSFSVPINNNTVLGFHGRAGDYLDAIGIFVKPDTAV

FASTA format

2.2 Composition

Counts of Amino Acids

'A': 19, 'R': 5, 'N': 21, 'D': 27, 'C': 1, 'Q': 5, 'E': 15, 'G': 71, 'H': 11, 'I': 42, 'L': 20, 'K': 30, 'M': 1, 'F': 28, 'P': 19, 'S': 47, 'T': 32, 'W': 8, 'Y': 20, 'V': 25

Frequencies of Amino Acids

'A': 4.25%, 'R': 1.12%, 'N': 4.7%, 'D': 6.04%, 'C': 0.22%, 'Q': 1.12%, 'E': 3.36%, 'G': 15.88%, 'H': 2.46%, 'I': 9.4%, 'L': 4.47%, 'K': 6.71%, 'M': 0.22%, 'F': 6.26%, 'P': 4.25%, 'S': 10.51%, 'T': 7.16%, 'W': 1.79%, 'Y': 4.47%, 'V': 5.59%

Missing Amino Acid(s)

No Amino Acid(s) are missing in this protein

Most Occurring Amino Acid(s)

Less Occurring Amino Acid(s)

C, M

Hydrophobic Amino Acid(s) Count

233

Hydrophilic Amino Acid(s) Count

214

Basic Amino Acid(s) Count

Acidic Amino Acid(s) Count

Modified Amino Acid(s) Count

Modified Amino Acid(s) Frequencies

Computed by biopython (version 1.79) & proteinAnalysis (version 1)

3 Physicochemical Properties

Sl. No.	Properties	Values	Reference
1.	Molecular Mass	47410.8 Da	Computed by ProtParam module (biopython 1.79)
2.	Aliphatic Index	74.564	Computed by ProtParam module (biopython 1.79)
3.	Instability Index (Half Life)	6.506	Computed by ProtParam module (biopython 1.79)
4.	Hydrophobicity (GRAVY)	-0.174	Computed by ProtParam module (biopython 1.79)
5.	Hydrophobic Moment	0.562	Computed by ProtParam module (biopython 1.79)
6.	Isoelectric Point	6.29	Computed by ProtParam module (biopython 1.79)
7.	Charge (at pH 7)	-6.051	Computed by ProtParam module (biopython 1.79)
8.	Secondary Structure Fraction	0.32, 0.353, 0.123 [Helix, Turn, Sheet]	Computed by ProtParam module (biopython 1.79)
9.	Aromaticity	0.125	Computed by ProtParam module (biopython 1.79)
10.	Molar Extinction Coefficient (cysteine\|cystine)	73800, 73800	Computed by ProtParam module (biopython 1.79)

4 Activity Details

4.1 Target Organism(s)

L.infantum

4.2 Antimicrobial Activity

Antimicrobial

4.3 Enzymatic Activity

Not found

4.4 Inhibitory Effect

Not found

4.5 Other Biological Activity

Lectin, Non-hemolytic, Non-ribosomal

Activity data manually curated from Literature and UniProt

5 Database Cross-references

5.1 Literature Database

5.1.1 PubMed

No PMID found

5.2 Protein Sequence Databases

UniProt: C0HLR9

5.3 3D Structure Databases

No PDB Ids found

AlphaFoldDB: C0HLR9

5.4 Nucleotide Sequence Databases

No entries found in GenBank or EMBL

CCDS: Not found

RefSeq: Not found

5.5 Protein-Protein Interaction Databases

STRING: Not found

IntAct: Not found

MINT: Not found

DIP: Not found

BioGRID: Not found

5.6 Ligand Databases

BindingDB: Not found

DrugBank: Not found

ChEMBL: Not found

5.7 Family & Domain Databases

InterPro: IPR001229, IPR033734, IPR036404

PANTHER: Not found

PROSITE: PS51752

5.8 Genome Annotation Databases

Ensembl: Not found

KEGG: Not found

5.9 Phylogenomic Databases

GeneTree: Not found

5.10 Enzyme & Pathway Databases

BRENDA: Not found

BioCyc: Not found

5.11 Protein-RNA Interaction Databases

RNAct: Not found

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