AMPDB_35187 | Chitin-binding protein 3
PEPTIDE SUMMARY
Chitin-binding protein 3
1 General Description
AMPDB ID: AMPDB_35187
Protein Names: Chitin-binding protein 3 (Mo-CBP3)
Protein Family: Nil
Gene Name: Nil
Protein Length: 22 AA
Protein Existence: Evidence at protein level
2 Protein Sequence & Composition
2.1 Sequence
CPAIQRCCQQLRNIQPPCRCCQ
FASTA format
2.2 Composition
Counts of Amino Acids
'A': 1, 'R': 3, 'N': 1, 'D': 0, 'C': 6, 'Q': 5, 'E': 0, 'G': 0, 'H': 0, 'I': 2, 'L': 1, 'K': 0, 'M': 0, 'F': 0, 'P': 3, 'S': 0, 'T': 0, 'W': 0, 'Y': 0, 'V': 0
Frequencies of Amino Acids
'A': 4.55%, 'R': 13.64%, 'N': 4.55%, 'D': 0%, 'C': 27.27%, 'Q': 22.73%, 'E': 0%, 'G': 0%, 'H': 0%, 'I': 9.09%, 'L': 4.55%, 'K': 0%, 'M': 0%, 'F': 0%, 'P': 13.64%, 'S': 0%, 'T': 0%, 'W': 0%, 'Y': 0%, 'V': 0%
Missing Amino Acid(s)
D, E, F, G, H, K, M, S, T, V, W, Y
Most Occurring Amino Acid(s)
C
Less Occurring Amino Acid(s)
A, L, N
Hydrophobic Amino Acid(s) Count
7
Hydrophilic Amino Acid(s) Count
15
Basic Amino Acid(s) Count
0
Acidic Amino Acid(s) Count
3
Modified Amino Acid(s) Count
0
Modified Amino Acid(s) Frequencies
0
Computed by biopython (version 1.79) & proteinAnalysis (version 1)
3 Physicochemical Properties
Sl. No. Properties Values Reference
1. Molecular Mass 2562.07 Da Computed by ProtParam module (biopython 1.79)
2. Aliphatic Index 57.727 Computed by ProtParam module (biopython 1.79)
3. Instability Index (Half Life) 77.373 Computed by ProtParam module (biopython 1.79)
4. Hydrophobicity (GRAVY) -0.441 Computed by ProtParam module (biopython 1.79)
5. Hydrophobic Moment 0.73 Computed by ProtParam module (biopython 1.79)
6. Isoelectric Point 8.389 Computed by ProtParam module (biopython 1.79)
7. Charge (at pH 7) 2.626 Computed by ProtParam module (biopython 1.79)
8. Secondary Structure Fraction 0.136, 0.182, 0.091 [Helix, Turn, Sheet] Computed by ProtParam module (biopython 1.79)
9. Aromaticity 0 Computed by ProtParam module (biopython 1.79)
10. Molar Extinction Coefficient (cysteine|cystine) 0, 375 Computed by ProtParam module (biopython 1.79)
4 Activity Details
4.1 Target Organism(s)
C.albicans, C.parapsilosis, C.tropicalis (Gram-negative), F.solani (Gram-positive)
4.2 Antimicrobial Activity
Antimicrobial, Fungicide, Anti-candida, Anti-gram-negative, Anti-gram-Positive
4.3 Enzymatic Activity
Not found
4.4 Inhibitory Effect
Not found
4.5 Other Biological Activity
Non-hemolytic, Non-ribosomal
Activity data manually curated from Literature and UniProt
5 Database Cross-references
5.1 Literature Database
5.1.1 PubMed
Citation 1: Gifoni JM, Oliveira JT, Oliveira HD, et al. A novel chitin-binding protein from Moringa oleifera seed with potential for plant disease control. Biopolymers. 2012;98(4):406-15. Published 2012. doi:10.1002/bip.22068
PMID: 23193603
Citation 2: Neto JXS, Pereira ML, Oliveira JTA, et al. A Chitin-binding Protein Purified from Moringa oleifera Seeds Presents Anticandidal Activity by Increasing Cell Membrane Permeability and Reactive Oxygen Species Production. Front Microbiol. 2017;8:980. Published 2017. doi:10.3389/fmicb.2017.00980
PMID: 28634471
5.2 Protein Sequence Databases
UniProt: P86528
5.3 3D Structure Databases
No PDB Ids found
AlphaFoldDB: P86528
5.4 Nucleotide Sequence Databases
No entries found in GenBank or EMBL
CCDS: Not found
RefSeq: Not found
5.5 Protein-Protein Interaction Databases
STRING: Not found
IntAct: Not found
MINT: Not found
DIP: Not found
BioGRID: Not found
5.6 Ligand Databases
BindingDB: Not found
DrugBank: Not found
ChEMBL: Not found
5.7 Family & Domain Databases
InterPro: Not found
PANTHER: Not found
PROSITE: Not found
5.8 Genome Annotation Databases
Ensembl: Not found
KEGG: Not found
5.9 Phylogenomic Databases
GeneTree: Not found
5.10 Enzyme & Pathway Databases
BRENDA: Not found
BioCyc: Not found
5.11 Protein-RNA Interaction Databases
RNAct: Not found




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